This is pdfeTeX, Version 3.141592-1.21a-2.2 (Web2C 7.5.4) (format=pdflatex 2010.5.5)  2 NOV 2012 11:20
entering extended mode
**pyPLUTO.tex
(./pyPLUTO.tex
LaTeX2e <2008/12/01>
Babel <v3.8d> and hyphenation patterns for american, french, german, ngerman, b
ahasa, basque, bulgarian, catalan, croatian, czech, danish, dutch, esperanto, e
stonian, finnish, greek, icelandic, irish, italian, latin, magyar, norsk, polis
h, portuges, romanian, russian, serbian, slovak, slovene, spanish, swedish, tur
kish, ukrainian, nohyphenation, loaded.
(./sphinxmanual.cls
Document Class: sphinxmanual 2009/06/02 Document class (Sphinx manual)
(/sw/share/texmf-dist/tex/latex/base/report.cls
Document Class: report 2004/02/16 v1.4f Standard LaTeX document class
(/sw/share/texmf-dist/tex/latex/base/size10.clo
File: size10.clo 2004/02/16 v1.4f Standard LaTeX file (size option)
)
\c@part=\count79
\c@chapter=\count80
\c@section=\count81
\c@subsection=\count82
\c@subsubsection=\count83
\c@paragraph=\count84
\c@subparagraph=\count85
\c@figure=\count86
\c@table=\count87
\abovecaptionskip=\skip41
\belowcaptionskip=\skip42
\bibindent=\dimen102
))
(/sw/share/texmf-dist/tex/latex/base/inputenc.sty
Package: inputenc 2004/02/05 v1.0d Input encoding file

(/sw/share/texmf-dist/tex/latex/base/utf8.def
File: utf8.def 2004/02/09 v1.1b UTF-8 support for inputenc
Now handling font encoding OML ...
... no UTF-8 mapping file for font encoding OML
Now handling font encoding T1 ...
... processing UTF-8 mapping file for font encoding T1

(/sw/share/texmf-dist/tex/latex/base/t1enc.dfu
File: t1enc.dfu 2004/02/09 v1.1b UTF-8 support for inputenc
   defining Unicode char U+00A1 (decimal 161)
   defining Unicode char U+00A3 (decimal 163)
   defining Unicode char U+00AB (decimal 171)
   defining Unicode char U+00BB (decimal 187)
   defining Unicode char U+00BF (decimal 191)
   defining Unicode char U+00C0 (decimal 192)
   defining Unicode char U+00C1 (decimal 193)
   defining Unicode char U+00C2 (decimal 194)
   defining Unicode char U+00C3 (decimal 195)
   defining Unicode char U+00C4 (decimal 196)
   defining Unicode char U+00C5 (decimal 197)
   defining Unicode char U+00C6 (decimal 198)
   defining Unicode char U+00C7 (decimal 199)
   defining Unicode char U+00C8 (decimal 200)
   defining Unicode char U+00C9 (decimal 201)
   defining Unicode char U+00CA (decimal 202)
   defining Unicode char U+00CB (decimal 203)
   defining Unicode char U+00CC (decimal 204)
   defining Unicode char U+00CD (decimal 205)
   defining Unicode char U+00CE (decimal 206)
   defining Unicode char U+00CF (decimal 207)
   defining Unicode char U+00D0 (decimal 208)
   defining Unicode char U+00D1 (decimal 209)
   defining Unicode char U+00D2 (decimal 210)
   defining Unicode char U+00D3 (decimal 211)
   defining Unicode char U+00D4 (decimal 212)
   defining Unicode char U+00D5 (decimal 213)
   defining Unicode char U+00D6 (decimal 214)
   defining Unicode char U+00D8 (decimal 216)
   defining Unicode char U+00D9 (decimal 217)
   defining Unicode char U+00DA (decimal 218)
   defining Unicode char U+00DB (decimal 219)
   defining Unicode char U+00DC (decimal 220)
   defining Unicode char U+00DD (decimal 221)
   defining Unicode char U+00DE (decimal 222)
   defining Unicode char U+00DF (decimal 223)
   defining Unicode char U+00E0 (decimal 224)
   defining Unicode char U+00E1 (decimal 225)
   defining Unicode char U+00E2 (decimal 226)
   defining Unicode char U+00E3 (decimal 227)
   defining Unicode char U+00E4 (decimal 228)
   defining Unicode char U+00E5 (decimal 229)
   defining Unicode char U+00E6 (decimal 230)
   defining Unicode char U+00E7 (decimal 231)
   defining Unicode char U+00E8 (decimal 232)
   defining Unicode char U+00E9 (decimal 233)
   defining Unicode char U+00EA (decimal 234)
   defining Unicode char U+00EB (decimal 235)
   defining Unicode char U+00EC (decimal 236)
   defining Unicode char U+00ED (decimal 237)
   defining Unicode char U+00EE (decimal 238)
   defining Unicode char U+00EF (decimal 239)
   defining Unicode char U+00F0 (decimal 240)
   defining Unicode char U+00F1 (decimal 241)
   defining Unicode char U+00F2 (decimal 242)
   defining Unicode char U+00F3 (decimal 243)
   defining Unicode char U+00F4 (decimal 244)
   defining Unicode char U+00F5 (decimal 245)
   defining Unicode char U+00F6 (decimal 246)
   defining Unicode char U+00F8 (decimal 248)
   defining Unicode char U+00F9 (decimal 249)
   defining Unicode char U+00FA (decimal 250)
   defining Unicode char U+00FB (decimal 251)
   defining Unicode char U+00FC (decimal 252)
   defining Unicode char U+00FD (decimal 253)
   defining Unicode char U+00FE (decimal 254)
   defining Unicode char U+00FF (decimal 255)
   defining Unicode char U+0102 (decimal 258)
   defining Unicode char U+0103 (decimal 259)
   defining Unicode char U+0104 (decimal 260)
   defining Unicode char U+0105 (decimal 261)
   defining Unicode char U+0106 (decimal 262)
   defining Unicode char U+0107 (decimal 263)
   defining Unicode char U+010C (decimal 268)
   defining Unicode char U+010D (decimal 269)
   defining Unicode char U+010E (decimal 270)
   defining Unicode char U+010F (decimal 271)
   defining Unicode char U+0110 (decimal 272)
   defining Unicode char U+0111 (decimal 273)
   defining Unicode char U+0118 (decimal 280)
   defining Unicode char U+0119 (decimal 281)
   defining Unicode char U+011A (decimal 282)
   defining Unicode char U+011B (decimal 283)
   defining Unicode char U+011E (decimal 286)
   defining Unicode char U+011F (decimal 287)
   defining Unicode char U+0130 (decimal 304)
   defining Unicode char U+0131 (decimal 305)
   defining Unicode char U+0139 (decimal 313)
   defining Unicode char U+013A (decimal 314)
   defining Unicode char U+013D (decimal 317)
   defining Unicode char U+013E (decimal 318)
   defining Unicode char U+0141 (decimal 321)
   defining Unicode char U+0142 (decimal 322)
   defining Unicode char U+0143 (decimal 323)
   defining Unicode char U+0144 (decimal 324)
   defining Unicode char U+0147 (decimal 327)
   defining Unicode char U+0148 (decimal 328)
   defining Unicode char U+014A (decimal 330)
   defining Unicode char U+014B (decimal 331)
   defining Unicode char U+0150 (decimal 336)
   defining Unicode char U+0151 (decimal 337)
   defining Unicode char U+0152 (decimal 338)
   defining Unicode char U+0153 (decimal 339)
   defining Unicode char U+0154 (decimal 340)
   defining Unicode char U+0155 (decimal 341)
   defining Unicode char U+0158 (decimal 344)
   defining Unicode char U+0159 (decimal 345)
   defining Unicode char U+015A (decimal 346)
   defining Unicode char U+015B (decimal 347)
   defining Unicode char U+015E (decimal 350)
   defining Unicode char U+015F (decimal 351)
   defining Unicode char U+0160 (decimal 352)
   defining Unicode char U+0161 (decimal 353)
   defining Unicode char U+0162 (decimal 354)
   defining Unicode char U+0163 (decimal 355)
   defining Unicode char U+0164 (decimal 356)
   defining Unicode char U+0165 (decimal 357)
   defining Unicode char U+016E (decimal 366)
   defining Unicode char U+016F (decimal 367)
   defining Unicode char U+0170 (decimal 368)
   defining Unicode char U+0171 (decimal 369)
   defining Unicode char U+0178 (decimal 376)
   defining Unicode char U+0179 (decimal 377)
   defining Unicode char U+017A (decimal 378)
   defining Unicode char U+017B (decimal 379)
   defining Unicode char U+017C (decimal 380)
   defining Unicode char U+017D (decimal 381)
   defining Unicode char U+017E (decimal 382)
   defining Unicode char U+200C (decimal 8204)
   defining Unicode char U+2013 (decimal 8211)
   defining Unicode char U+2014 (decimal 8212)
   defining Unicode char U+2018 (decimal 8216)
   defining Unicode char U+2019 (decimal 8217)
   defining Unicode char U+201A (decimal 8218)
   defining Unicode char U+201C (decimal 8220)
   defining Unicode char U+201D (decimal 8221)
   defining Unicode char U+201E (decimal 8222)
   defining Unicode char U+2030 (decimal 8240)
   defining Unicode char U+2031 (decimal 8241)
   defining Unicode char U+2039 (decimal 8249)
   defining Unicode char U+203A (decimal 8250)
   defining Unicode char U+2423 (decimal 9251)
)
Now handling font encoding OT1 ...
... processing UTF-8 mapping file for font encoding OT1

(/sw/share/texmf-dist/tex/latex/base/ot1enc.dfu
File: ot1enc.dfu 2004/02/09 v1.1b UTF-8 support for inputenc
   defining Unicode char U+00A1 (decimal 161)
   defining Unicode char U+00A3 (decimal 163)
   defining Unicode char U+00B8 (decimal 184)
   defining Unicode char U+00BF (decimal 191)
   defining Unicode char U+00C5 (decimal 197)
   defining Unicode char U+00C6 (decimal 198)
   defining Unicode char U+00D8 (decimal 216)
   defining Unicode char U+00DF (decimal 223)
   defining Unicode char U+00E6 (decimal 230)
   defining Unicode char U+00EC (decimal 236)
   defining Unicode char U+00ED (decimal 237)
   defining Unicode char U+00EE (decimal 238)
   defining Unicode char U+00EF (decimal 239)
   defining Unicode char U+00F8 (decimal 248)
   defining Unicode char U+0131 (decimal 305)
   defining Unicode char U+0141 (decimal 321)
   defining Unicode char U+0142 (decimal 322)
   defining Unicode char U+0152 (decimal 338)
   defining Unicode char U+0153 (decimal 339)
   defining Unicode char U+2013 (decimal 8211)
   defining Unicode char U+2014 (decimal 8212)
   defining Unicode char U+2018 (decimal 8216)
   defining Unicode char U+2019 (decimal 8217)
   defining Unicode char U+201C (decimal 8220)
   defining Unicode char U+201D (decimal 8221)
)
Now handling font encoding OMS ...
... processing UTF-8 mapping file for font encoding OMS

(/sw/share/texmf-dist/tex/latex/base/omsenc.dfu
File: omsenc.dfu 2004/02/09 v1.1b UTF-8 support for inputenc
   defining Unicode char U+00A7 (decimal 167)
   defining Unicode char U+00B6 (decimal 182)
   defining Unicode char U+02D9 (decimal 729)
   defining Unicode char U+2020 (decimal 8224)
   defining Unicode char U+2021 (decimal 8225)
   defining Unicode char U+2022 (decimal 8226)
)
Now handling font encoding OMX ...
... no UTF-8 mapping file for font encoding OMX
Now handling font encoding U ...
... no UTF-8 mapping file for font encoding U
   defining Unicode char U+00A9 (decimal 169)
   defining Unicode char U+00AA (decimal 170)
   defining Unicode char U+00AE (decimal 174)
   defining Unicode char U+00BA (decimal 186)
   defining Unicode char U+02C6 (decimal 710)
   defining Unicode char U+02CA (decimal 714)
   defining Unicode char U+200C (decimal 8204)
   defining Unicode char U+2026 (decimal 8230)
   defining Unicode char U+2122 (decimal 8482)
   defining Unicode char U+2423 (decimal 9251)
))
   defining Unicode char U+00A0 (decimal 160)

(/sw/share/texmf-dist/tex/latex/base/fontenc.sty
Package: fontenc 2004/02/22 v1.99f Standard LaTeX package

(/sw/share/texmf-dist/tex/latex/base/t1enc.def
File: t1enc.def 2004/02/22 v1.99f Standard LaTeX file
LaTeX Font Info:    Redeclaring font encoding T1 on input line 43.
))
(/sw/share/texmf-dist/tex/generic/babel/babel.sty
Package: babel 2004/11/20 v3.8d The Babel package

(/sw/share/texmf-dist/tex/generic/babel/english.ldf
Language: english 2004/06/14 v3.3o English support from the babel system

(/sw/share/texmf-dist/tex/generic/babel/babel.def
File: babel.def 2004/11/20 v3.8d Babel common definitions
\babel@savecnt=\count88
\U@D=\dimen103
)
\l@british = a dialect from \language\l@english 
\l@UKenglish = a dialect from \language\l@english 
\l@canadian = a dialect from \language\l@american 
\l@australian = a dialect from \language\l@british 
\l@newzealand = a dialect from \language\l@british 
))
(/sw/share/texmf-dist/tex/latex/psnfss/times.sty
Package: times 2004/09/15 PSNFSS-v9.2 (SPQR) 
) (./fncychap.sty
Package: fncychap 2007/07/30 v1.34 LaTeX package (Revised chapters)
\RW=\skip43
\mylen=\skip44
\myhi=\skip45
\px=\skip46
\py=\skip47
\pyy=\skip48
\pxx=\skip49
\c@AlphaCnt=\count89
\c@AlphaDecCnt=\count90
)
(/sw/share/texmf-dist/tex/latex/tools/longtable.sty
Package: longtable 2004/02/01 v4.11 Multi-page Table package (DPC)
\LTleft=\skip50
\LTright=\skip51
\LTpre=\skip52
\LTpost=\skip53
\LTchunksize=\count91
\LTcapwidth=\dimen104
\LT@head=\box26
\LT@firsthead=\box27
\LT@foot=\box28
\LT@lastfoot=\box29
\LT@cols=\count92
\LT@rows=\count93
\c@LT@tables=\count94
\c@LT@chunks=\count95
\LT@p@ftn=\toks14
) (./sphinx.sty
Package: sphinx 2010/01/15 LaTeX package (Sphinx markup)

(/sw/share/texmf-dist/tex/latex/base/textcomp.sty
Package: textcomp 2004/02/22 v1.99f Standard LaTeX package
Package textcomp Info: Sub-encoding information:
(textcomp)               5 = only ISO-Adobe without \textcurrency
(textcomp)               4 = 5 + \texteuro
(textcomp)               3 = 4 + \textohm
(textcomp)               2 = 3 + \textestimated + \textcurrency
(textcomp)               1 = TS1 - \textcircled - \t
(textcomp)               0 = TS1 (full)
(textcomp)             Font families with sub-encoding setting implement
(textcomp)             only a restricted character set as indicated.
(textcomp)             Family '?' is the default used for unknown fonts.
(textcomp)             See the documentation for details.
Package textcomp Info: Setting ? sub-encoding to TS1/1 on input line 71.

(/sw/share/texmf-dist/tex/latex/base/ts1enc.def
File: ts1enc.def 2001/06/05 v3.0e (jk/car/fm) Standard LaTeX file
Now handling font encoding TS1 ...
... processing UTF-8 mapping file for font encoding TS1

(/sw/share/texmf-dist/tex/latex/base/ts1enc.dfu
File: ts1enc.dfu 2004/02/09 v1.1b UTF-8 support for inputenc
   defining Unicode char U+00A2 (decimal 162)
   defining Unicode char U+00A3 (decimal 163)
   defining Unicode char U+00A4 (decimal 164)
   defining Unicode char U+00A5 (decimal 165)
   defining Unicode char U+00A6 (decimal 166)
   defining Unicode char U+00A7 (decimal 167)
   defining Unicode char U+00A8 (decimal 168)
   defining Unicode char U+00A9 (decimal 169)
   defining Unicode char U+00AA (decimal 170)
   defining Unicode char U+00AC (decimal 172)
   defining Unicode char U+00AE (decimal 174)
   defining Unicode char U+00AF (decimal 175)
   defining Unicode char U+00B0 (decimal 176)
   defining Unicode char U+00B1 (decimal 177)
   defining Unicode char U+00B2 (decimal 178)
   defining Unicode char U+00B3 (decimal 179)
   defining Unicode char U+00B4 (decimal 180)
   defining Unicode char U+00B5 (decimal 181)
   defining Unicode char U+00B6 (decimal 182)
   defining Unicode char U+00B7 (decimal 183)
   defining Unicode char U+00B9 (decimal 185)
   defining Unicode char U+00BA (decimal 186)
   defining Unicode char U+00BC (decimal 188)
   defining Unicode char U+00BD (decimal 189)
   defining Unicode char U+00BE (decimal 190)
   defining Unicode char U+00D7 (decimal 215)
   defining Unicode char U+00F7 (decimal 247)
   defining Unicode char U+0192 (decimal 402)
   defining Unicode char U+02C7 (decimal 711)
   defining Unicode char U+02D8 (decimal 728)
   defining Unicode char U+02DD (decimal 733)
   defining Unicode char U+0E37 (decimal 3639)
   defining Unicode char U+2016 (decimal 8214)
   defining Unicode char U+2020 (decimal 8224)
   defining Unicode char U+2021 (decimal 8225)
   defining Unicode char U+2022 (decimal 8226)
   defining Unicode char U+2030 (decimal 8240)
   defining Unicode char U+2031 (decimal 8241)
   defining Unicode char U+203B (decimal 8251)
   defining Unicode char U+203D (decimal 8253)
   defining Unicode char U+2044 (decimal 8260)
   defining Unicode char U+204E (decimal 8270)
   defining Unicode char U+2052 (decimal 8274)
   defining Unicode char U+20A1 (decimal 8353)
   defining Unicode char U+20A4 (decimal 8356)
   defining Unicode char U+20A6 (decimal 8358)
   defining Unicode char U+20A9 (decimal 8361)
   defining Unicode char U+20AB (decimal 8363)
   defining Unicode char U+20AC (decimal 8364)
   defining Unicode char U+20B1 (decimal 8369)
   defining Unicode char U+2103 (decimal 8451)
   defining Unicode char U+2116 (decimal 8470)
   defining Unicode char U+2117 (decimal 8471)
   defining Unicode char U+211E (decimal 8478)
   defining Unicode char U+2120 (decimal 8480)
   defining Unicode char U+2122 (decimal 8482)
   defining Unicode char U+2126 (decimal 8486)
   defining Unicode char U+2127 (decimal 8487)
   defining Unicode char U+212E (decimal 8494)
   defining Unicode char U+2190 (decimal 8592)
   defining Unicode char U+2191 (decimal 8593)
   defining Unicode char U+2192 (decimal 8594)
   defining Unicode char U+2193 (decimal 8595)
   defining Unicode char U+2329 (decimal 9001)
   defining Unicode char U+232A (decimal 9002)
   defining Unicode char U+2422 (decimal 9250)
   defining Unicode char U+25E6 (decimal 9702)
   defining Unicode char U+25EF (decimal 9711)
   defining Unicode char U+266A (decimal 9834)
))
LaTeX Info: Redefining \oldstylenums on input line 266.
Package textcomp Info: Setting cmr sub-encoding to TS1/0 on input line 281.
Package textcomp Info: Setting cmss sub-encoding to TS1/0 on input line 282.
Package textcomp Info: Setting cmtt sub-encoding to TS1/0 on input line 283.
Package textcomp Info: Setting cmvtt sub-encoding to TS1/0 on input line 284.
Package textcomp Info: Setting cmbr sub-encoding to TS1/0 on input line 285.
Package textcomp Info: Setting cmtl sub-encoding to TS1/0 on input line 286.
Package textcomp Info: Setting ccr sub-encoding to TS1/0 on input line 287.
Package textcomp Info: Setting ptm sub-encoding to TS1/4 on input line 288.
Package textcomp Info: Setting pcr sub-encoding to TS1/4 on input line 289.
Package textcomp Info: Setting phv sub-encoding to TS1/4 on input line 290.
Package textcomp Info: Setting ppl sub-encoding to TS1/3 on input line 291.
Package textcomp Info: Setting pag sub-encoding to TS1/4 on input line 292.
Package textcomp Info: Setting pbk sub-encoding to TS1/4 on input line 293.
Package textcomp Info: Setting pnc sub-encoding to TS1/4 on input line 294.
Package textcomp Info: Setting pzc sub-encoding to TS1/4 on input line 295.
Package textcomp Info: Setting bch sub-encoding to TS1/4 on input line 296.
Package textcomp Info: Setting put sub-encoding to TS1/5 on input line 297.
Package textcomp Info: Setting uag sub-encoding to TS1/5 on input line 298.
Package textcomp Info: Setting ugq sub-encoding to TS1/5 on input line 299.
Package textcomp Info: Setting ul8 sub-encoding to TS1/4 on input line 300.
Package textcomp Info: Setting ul9 sub-encoding to TS1/4 on input line 301.
Package textcomp Info: Setting augie sub-encoding to TS1/5 on input line 302.
Package textcomp Info: Setting dayrom sub-encoding to TS1/3 on input line 303.
Package textcomp Info: Setting dayroms sub-encoding to TS1/3 on input line 304.

Package textcomp Info: Setting pxr sub-encoding to TS1/0 on input line 305.
Package textcomp Info: Setting pxss sub-encoding to TS1/0 on input line 306.
Package textcomp Info: Setting pxtt sub-encoding to TS1/0 on input line 307.
Package textcomp Info: Setting txr sub-encoding to TS1/0 on input line 308.
Package textcomp Info: Setting txss sub-encoding to TS1/0 on input line 309.
Package textcomp Info: Setting txtt sub-encoding to TS1/0 on input line 310.
Package textcomp Info: Setting futs sub-encoding to TS1/4 on input line 311.
Package textcomp Info: Setting futx sub-encoding to TS1/4 on input line 312.
Package textcomp Info: Setting futj sub-encoding to TS1/4 on input line 313.
Package textcomp Info: Setting hlh sub-encoding to TS1/3 on input line 314.
Package textcomp Info: Setting hls sub-encoding to TS1/3 on input line 315.
Package textcomp Info: Setting hlst sub-encoding to TS1/3 on input line 316.
Package textcomp Info: Setting hlct sub-encoding to TS1/5 on input line 317.
Package textcomp Info: Setting hlx sub-encoding to TS1/5 on input line 318.
Package textcomp Info: Setting hlce sub-encoding to TS1/5 on input line 319.
Package textcomp Info: Setting hlcn sub-encoding to TS1/5 on input line 320.
Package textcomp Info: Setting hlcw sub-encoding to TS1/5 on input line 321.
Package textcomp Info: Setting hlcf sub-encoding to TS1/5 on input line 322.
Package textcomp Info: Setting pplx sub-encoding to TS1/3 on input line 323.
Package textcomp Info: Setting pplj sub-encoding to TS1/3 on input line 324.
Package textcomp Info: Setting ptmx sub-encoding to TS1/4 on input line 325.
Package textcomp Info: Setting ptmj sub-encoding to TS1/4 on input line 326.
)
(/sw/share/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty
\fancy@headwidth=\skip54
\f@ncyO@elh=\skip55
\f@ncyO@erh=\skip56
\f@ncyO@olh=\skip57
\f@ncyO@orh=\skip58
\f@ncyO@elf=\skip59
\f@ncyO@erf=\skip60
\f@ncyO@olf=\skip61
\f@ncyO@orf=\skip62
)
(/sw/share/texmf-dist/tex/latex/fancybox/fancybox.sty
Package: fancybox 2000/09/19 1.3

Style option: `fancybox' v1.3 <2000/09/19> (tvz)
\@fancybox=\box30
\shadowsize=\dimen105
\@Sbox=\box31
\do@VerbBox=\toks15
\the@fancyput=\toks16
\this@fancyput=\toks17
\EndVerbatimTokens=\toks18
\Verbatim@Outfile=\write3
\Verbatim@Infile=\read1
) (/sw/share/texmf-dist/tex/latex/titlesec/titlesec.sty
Package: titlesec 2005/01/22 v2.6 Sectioning titles
\ttl@box=\box32
\beforetitleunit=\skip63
\aftertitleunit=\skip64
\ttl@plus=\dimen106
\ttl@minus=\dimen107
\titlewidth=\dimen108
\titlewidthlast=\dimen109
\titlewidthfirst=\dimen110
) (./tabulary.sty
Package: tabulary 2007/10/02 v0.9 tabulary package (DPC)

(/sw/share/texmf-dist/tex/latex/tools/array.sty
Package: array 2003/12/17 v2.4a Tabular extension package (FMi)
\col@sep=\dimen111
\extrarowheight=\dimen112
\NC@list=\toks19
\extratabsurround=\skip65
\backup@length=\skip66
)
\TY@count=\count96
\TY@linewidth=\dimen113
\tymin=\dimen114
\tymax=\dimen115
\TY@tablewidth=\dimen116
)
(/sw/share/texmf-dist/tex/latex/amsmath/amsmath.sty
Package: amsmath 2000/07/18 v2.13 AMS math features
\@mathmargin=\skip67

For additional information on amsmath, use the `?' option.
(/sw/share/texmf-dist/tex/latex/amsmath/amstext.sty
Package: amstext 2000/06/29 v2.01

(/sw/share/texmf-dist/tex/latex/amsmath/amsgen.sty
File: amsgen.sty 1999/11/30 v2.0
\@emptytoks=\toks20
\ex@=\dimen117
))
(/sw/share/texmf-dist/tex/latex/amsmath/amsbsy.sty
Package: amsbsy 1999/11/29 v1.2d
\pmbraise@=\dimen118
)
(/sw/share/texmf-dist/tex/latex/amsmath/amsopn.sty
Package: amsopn 1999/12/14 v2.01 operator names
)
\inf@bad=\count97
LaTeX Info: Redefining \frac on input line 211.
\uproot@=\count98
\leftroot@=\count99
LaTeX Info: Redefining \overline on input line 307.
\classnum@=\count100
\DOTSCASE@=\count101
LaTeX Info: Redefining \ldots on input line 379.
LaTeX Info: Redefining \dots on input line 382.
LaTeX Info: Redefining \cdots on input line 467.
\Mathstrutbox@=\box33
\strutbox@=\box34
\big@size=\dimen119
LaTeX Font Info:    Redeclaring font encoding OML on input line 567.
LaTeX Font Info:    Redeclaring font encoding OMS on input line 568.
\macc@depth=\count102
\c@MaxMatrixCols=\count103
\dotsspace@=\muskip10
\c@parentequation=\count104
\dspbrk@lvl=\count105
\tag@help=\toks21
\row@=\count106
\column@=\count107
\maxfields@=\count108
\andhelp@=\toks22
\eqnshift@=\dimen120
\alignsep@=\dimen121
\tagshift@=\dimen122
\tagwidth@=\dimen123
\totwidth@=\dimen124
\lineht@=\dimen125
\@envbody=\toks23
\multlinegap=\skip68
\multlinetaggap=\skip69
\mathdisplay@stack=\toks24
LaTeX Info: Redefining \[ on input line 2666.
LaTeX Info: Redefining \] on input line 2667.
)
(/sw/share/texmf-dist/tex/latex/base/makeidx.sty
Package: makeidx 2000/03/29 v1.0m Standard LaTeX package
)
(/sw/share/texmf-dist/tex/latex/framed/framed.sty
Package: framed 2003/07/21 v 0.8a: framed or shaded text with page breaks
\FrameRule=\dimen126
\FrameSep=\dimen127
)
(/sw/share/texmf-dist/tex/latex/base/ifthen.sty
Package: ifthen 2001/05/26 v1.1c Standard LaTeX ifthen package (DPC)
)
(/sw/share/texmf-dist/tex/latex/graphics/color.sty
Package: color 1999/02/16 v1.0i Standard LaTeX Color (DPC)

(/sw/share/texmf-dist/tex/latex/graphics/color.cfg
File: color.cfg 2005/02/03 v1.3 color configuration of teTeX/TeXLive
)
Package color Info: Driver file: pdftex.def on input line 125.

(/sw/share/texmf-dist/tex/latex/graphics/pdftex.def
File: pdftex.def 2002/06/19 v0.03k graphics/color for pdftex
\Gread@gobject=\count109
))
(/sw/share/texmf-dist/tex/latex/fancyvrb/fancyvrb.sty
Package: fancyvrb 1998/07/17

Style option: `fancyvrb' v2.6, with DG/SPQR fixes <1998/07/17> (tvz)
(/sw/share/texmf-dist/tex/latex/graphics/keyval.sty
Package: keyval 1999/03/16 v1.13 key=value parser (DPC)
\KV@toks@=\toks25
)
\FV@CodeLineNo=\count110
\FV@InFile=\read2
\FV@TabBox=\box35
\c@FancyVerbLine=\count111
\FV@StepNumber=\count112
\FV@OutFile=\write4

No file fancyvrb.cfg.
) (/sw/share/texmf-dist/tex/latex/threeparttable/threeparttable.sty
Package: threeparttable 2003/06/13  v 3.0
\@tempboxb=\box36
)
(/sw/share/texmf-dist/tex/latex/mdwtools/footnote.sty
Package: footnote 1997/01/28 1.13 Save footnotes around boxes
\fn@notes=\box37
\fn@width=\dimen128
)
(/sw/share/texmf-dist/tex/latex/wrapfig/wrapfig.sty
\wrapoverhang=\dimen129
\WF@size=\dimen130
\c@WF@wrappedlines=\count113
\WF@box=\box38
\WF@everypar=\toks26
Package: wrapfig 2003/01/31  v 3.6
)
(/sw/share/texmf-dist/tex/latex/parskip/parskip.sty
Package: parskip 2001/04/09 non-zero parskip adjustments
)
(/sw/share/texmf-dist/tex/latex/graphics/graphicx.sty
Package: graphicx 1999/02/16 v1.0f Enhanced LaTeX Graphics (DPC,SPQR)

(/sw/share/texmf-dist/tex/latex/graphics/graphics.sty
Package: graphics 2001/07/07 v1.0n Standard LaTeX Graphics (DPC,SPQR)

(/sw/share/texmf-dist/tex/latex/graphics/trig.sty
Package: trig 1999/03/16 v1.09 sin cos tan (DPC)
)
(/sw/share/texmf-dist/tex/latex/graphics/graphics.cfg
File: graphics.cfg 2005/02/03 v1.3 graphics configuration of teTeX/TeXLive
)
Package graphics Info: Driver file: pdftex.def on input line 80.
)
\Gin@req@height=\dimen131
\Gin@req@width=\dimen132
)
(/sw/share/texmf-dist/tex/plain/pdfcolor/pdfcolor.tex)
\distancetoright=\skip70
\py@argswidth=\skip71
\py@noticelength=\skip72
\lineblockindentation=\skip73
\image@box=\box39
\image@width=\dimen133

(/sw/share/texmf-dist/tex/latex/hyperref/hyperref.sty
Package: hyperref 2003/11/30 v6.74m Hypertext links for LaTeX
\@linkdim=\dimen134
\Hy@linkcounter=\count114
\Hy@pagecounter=\count115

(/sw/share/texmf-dist/tex/latex/hyperref/pd1enc.def
File: pd1enc.def 2003/11/30 v6.74m Hyperref: PDFDocEncoding definition (HO)
Now handling font encoding PD1 ...
... no UTF-8 mapping file for font encoding PD1
)
(/sw/share/texmf-dist/tex/latex/hyperref/hyperref.cfg
File: hyperref.cfg 2002/06/06 v1.2 hyperref configuration of TeXLive and teTeX
)
Package hyperref Info: Option `colorlinks' set `true' on input line 1830.
Package hyperref Info: Option `breaklinks' set `true' on input line 1830.
Package hyperref Info: Hyper figures OFF on input line 1880.
Package hyperref Info: Link nesting OFF on input line 1885.
Package hyperref Info: Hyper index ON on input line 1888.
Package hyperref Info: Plain pages ON on input line 1893.
Package hyperref Info: Backreferencing OFF on input line 1900.

Implicit mode ON; LaTeX internals redefined
Package hyperref Info: Bookmarks ON on input line 2004.
(/sw/share/texmf-dist/tex/latex/url/url.sty
\Urlmuskip=\muskip11
Package: url 2004/03/15  ver 3.1  Verb mode for urls, etc.
)
LaTeX Info: Redefining \url on input line 2143.
\Fld@menulength=\count116
\Field@Width=\dimen135
\Fld@charsize=\dimen136
\Choice@toks=\toks27
\Field@toks=\toks28
Package hyperref Info: Hyper figures OFF on input line 2618.
Package hyperref Info: Link nesting OFF on input line 2623.
Package hyperref Info: Hyper index ON on input line 2626.
Package hyperref Info: backreferencing OFF on input line 2633.
Package hyperref Info: Link coloring ON on input line 2636.
\c@Item=\count117
\c@Hfootnote=\count118
)
*hyperref using default driver hpdftex*
(/sw/share/texmf-dist/tex/latex/hyperref/hpdftex.def
File: hpdftex.def 2003/11/30 v6.74m Hyperref driver for pdfTeX

(/sw/share/texmf-dist/tex/latex/psnfss/pifont.sty
Package: pifont 2004/09/15 PSNFSS-v9.2 Pi font support (SPQR) 
LaTeX Font Info:    Try loading font information for U+pzd on input line 63.

(/sw/share/texmf-dist/tex/latex/psnfss/upzd.fd
File: upzd.fd 2001/06/04 font definitions for U/pzd.
)
LaTeX Font Info:    Try loading font information for U+psy on input line 64.

(/sw/share/texmf-dist/tex/latex/psnfss/upsy.fd
File: upsy.fd 2001/06/04 font definitions for U/psy.
))
\Fld@listcount=\count119
\@outlinefile=\write5
)
(/sw/share/texmf-dist/tex/latex/oberdiek/hypcap.sty
Package: hypcap 2001/08/27 v1.3 Adjusting anchors of captions (HO)
)
\DUlineblockindent=\skip74
)
(/sw/share/texmf-dist/tex/latex/multirow/multirow.sty
\bigstrutjot=\dimen137
)
\@indexfile=\write6
\openout6 = `pyPLUTO.idx'.


Writing index file pyPLUTO.idx
(./pyPLUTO.aux)
\openout1 = `pyPLUTO.aux'.

LaTeX Font Info:    Checking defaults for OML/cmm/m/it on input line 110.
LaTeX Font Info:    ... okay on input line 110.
LaTeX Font Info:    Checking defaults for T1/cmr/m/n on input line 110.
LaTeX Font Info:    ... okay on input line 110.
LaTeX Font Info:    Checking defaults for OT1/cmr/m/n on input line 110.
LaTeX Font Info:    ... okay on input line 110.
LaTeX Font Info:    Checking defaults for OMS/cmsy/m/n on input line 110.
LaTeX Font Info:    ... okay on input line 110.
LaTeX Font Info:    Checking defaults for OMX/cmex/m/n on input line 110.
LaTeX Font Info:    ... okay on input line 110.
LaTeX Font Info:    Checking defaults for U/cmr/m/n on input line 110.
LaTeX Font Info:    ... okay on input line 110.
LaTeX Font Info:    Checking defaults for TS1/cmr/m/n on input line 110.
LaTeX Font Info:    Try loading font information for TS1+cmr on input line 110.

 (/sw/share/texmf-dist/tex/latex/base/ts1cmr.fd
File: ts1cmr.fd 1999/05/25 v2.5h Standard LaTeX font definitions
)
LaTeX Font Info:    ... okay on input line 110.
LaTeX Font Info:    Checking defaults for PD1/pdf/m/n on input line 110.
LaTeX Font Info:    ... okay on input line 110.
LaTeX Font Info:    Try loading font information for T1+ptm on input line 110.

(/sw/share/texmf-dist/tex/latex/psnfss/t1ptm.fd
File: t1ptm.fd 2001/06/04 font definitions for T1/ptm.
)
(/sw/share/texmf-dist/tex/context/base/supp-pdf.tex
(/sw/share/texmf-dist/tex/context/base/supp-mis.tex
loading : Context Support Macros / Miscellaneous (2004.10.26)
\protectiondepth=\count120
\scratchcounter=\count121
\scratchtoks=\toks29
\scratchdimen=\dimen138
\scratchskip=\skip75
\scratchmuskip=\muskip12
\scratchbox=\box40
\scratchread=\read3
\scratchwrite=\write7
\zeropoint=\dimen139
\onepoint=\dimen140
\onebasepoint=\dimen141
\minusone=\count122
\thousandpoint=\dimen142
\onerealpoint=\dimen143
\emptytoks=\toks30
\nextbox=\box41
\nextdepth=\dimen144
\everyline=\toks31
\!!counta=\count123
\!!countb=\count124
\recursecounter=\count125
)
loading : Context Support Macros / PDF (2004.03.26)
\nofMPsegments=\count126
\nofMParguments=\count127
\MPscratchCnt=\count128
\MPscratchDim=\dimen145
\MPnumerator=\count129
\everyMPtoPDFconversion=\toks32
)
Package hyperref Info: Link coloring ON on input line 110.
 (/sw/share/texmf-dist/tex/latex/hyperref/nameref.sty
Package: nameref 2003/12/03 v2.21 Cross-referencing by name of section
\c@section@level=\count130
)
LaTeX Info: Redefining \ref on input line 110.
LaTeX Info: Redefining \pageref on input line 110.
 (./pyPLUTO.out)
(./pyPLUTO.out)
\openout5 = `pyPLUTO.out'.


Underfull \hbox (badness 10000) in paragraph at lines 113--113

 []

LaTeX Font Info:    Try loading font information for T1+phv on input line 113.
(/sw/share/texmf-dist/tex/latex/psnfss/t1phv.fd
File: t1phv.fd 2001/06/04 scalable font definitions for T1/phv.
)
LaTeX Font Info:    Font shape `T1/phv/bx/n' in size <24.88> not available
(Font)              Font shape `T1/phv/b/n' tried instead on input line 113.
LaTeX Font Info:    Font shape `T1/phv/m/it' in size <17.28> not available
(Font)              Font shape `T1/phv/m/sl' tried instead on input line 113.
LaTeX Font Info:    Font shape `T1/phv/bx/it' in size <17.28> not available
(Font)              Font shape `T1/phv/b/it' tried instead on input line 113.
LaTeX Font Info:    Font shape `T1/phv/b/it' in size <17.28> not available
(Font)              Font shape `T1/phv/b/sl' tried instead on input line 113.
LaTeX Font Info:    Font shape `T1/phv/bx/n' in size <17.28> not available
(Font)              Font shape `T1/phv/b/n' tried instead on input line 113.
 [1

{/sw/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2

] (./pyPLUTO.toc
LaTeX Font Info:    Font shape `T1/ptm/bx/n' in size <10> not available
(Font)              Font shape `T1/ptm/b/n' tried instead on input line 2.
)
\tf@toc=\write8
\openout8 = `pyPLUTO.toc'.


Adding blank page after the table of contents.
! pdfTeX warning (ext4): destination with the same identifier (name{page.1}) ha
s been already used, duplicate ignored
<to be read again> 
                   \penalty 
l.113 \tableofcontents
                      
LaTeX Font Info:    Font shape `T1/phv/bx/n' in size <10> not available
(Font)              Font shape `T1/phv/b/n' tried instead on input line 113.
 [1

]
! pdfTeX warning (ext4): destination with the same identifier (name{page.2}) ha
s been already used, duplicate ignored
<to be read again> 
                   \penalty 
l.113 \tableofcontents
                       [2]
! pdfTeX warning (ext4): destination with the same identifier (name{page.1}) ha
s been already used, duplicate ignored
<to be read again> 
                   \penalty 
l.122 \chapter
              {Information} [1

]
! pdfTeX warning (ext4): destination with the same identifier (name{page.2}) ha
s been already used, duplicate ignored
<to be read again> 
                   \penalty 
l.122 \chapter
              {Information} [2

]
Chapter 1.
LaTeX Font Info:    Font shape `T1/phv/bx/n' in size <14.4> not available
(Font)              Font shape `T1/phv/b/n' tried instead on input line 122.
[3] [4

]
Chapter 2.
LaTeX Font Info:    Try loading font information for TS1+ptm on input line 171.

(/sw/share/texmf-dist/tex/latex/psnfss/ts1ptm.fd
File: ts1ptm.fd 2001/06/04 font definitions for TS1/ptm.
)
LaTeX Font Info:    Try loading font information for T1+pcr on input line 172.

(/sw/share/texmf-dist/tex/latex/psnfss/t1pcr.fd
File: t1pcr.fd 2001/06/04 font definitions for T1/pcr.
)
Underfull \hbox (badness 10000) in paragraph at lines 172--173
[]\T1/ptm/m/n/10 Unzip/Untar the source code : \T1/pcr/m/n/10 unzip pyPLUTO-|ve
rsion|.zip \T1/ptm/m/n/10 or \T1/pcr/m/n/10 tar -xvzf
 []


Underfull \hbox (badness 10000) in paragraph at lines 194--195
[]\T1/ptm/m/n/10 Unzip/Untar the source code : \T1/pcr/m/n/10 unzip pyPLUTO-|ve
rsion|.zip \T1/ptm/m/n/10 or \T1/pcr/m/n/10 tar -xvzf
 []


Underfull \hbox (badness 10000) in paragraph at lines 203--204
[]\T1/ptm/m/n/10 Then ap-pend the fol-low-ing in your .bashrc : \T1/pcr/m/n/10 
export PYTHONPATH =<path to
 []


Underfull \hbox (badness 10000) in paragraph at lines 215--217
[]\T1/ptm/m/n/10 This code is also avail-able as a git repo and can be ob-taine
d as fol-lows : \T1/pcr/m/n/10 git clone
 []

LaTeX Font Info:    Font shape `T1/pcr/bx/n' in size <10> not available
(Font)              Font shape `T1/pcr/b/n' tried instead on input line 225.
[5] [6] [7] [8] [9]
Overfull \hbox (244.64496pt too wide) in paragraph at lines 612--613
[]\T1/pcr/m/n/10 I.pldisplay(D.v2,x1=D.x1,x2=D.x2,cbar=(True,'vertical'),title=
'Velocity',label1='Radius',label2='Height') 
 []

[10] [11] [12] [13] [14]
Chapter 3.
[15

] [16

]
Chapter 4.
<GetStarted.png, id=195, 1027.84pt x 770.88pt>
File: GetStarted.png Graphic file (type png)
 <use GetStarted.png>
File: GetStarted.png Graphic file (type png)

<use GetStarted.png> [17 <./GetStarted.png>] [18] [19] [20]
Chapter 5.
[21

] [22

] [23


] (./pyPLUTO.ind [24


] [25

]) (./pyPLUTO.aux) ) 
Here is how much of TeX's memory you used:
 6432 strings out of 94500
 81907 string characters out of 1176115
 145491 words of memory out of 1500000
 9374 multiletter control sequences out of 10000+50000
 50790 words of font info for 60 fonts, out of 1200000 for 2000
 581 hyphenation exceptions out of 8191
 34i,12n,45p,363b,481s stack positions out of 5000i,500n,6000p,200000b,5000s
PDF statistics:
 264 PDF objects out of 65536
 67 named destinations out of 20000
 110 words of extra memory for PDF output out of 65536
{/sw/share/texmf-dist/fonts/enc/dvips/psnfss/8r.enc}</sw/sh
are/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></sw/share/texmf-dist/fonts/
type1/bluesky/cm/cmmi10.pfb></sw/share/texmf-dist/fonts/type1/urw/times/utmri8a
.pfb></sw/share/texmf-dist/fonts/type1/urw/courier/ucrb8a.pfb></sw/share/texmf-
dist/fonts/type1/urw/courier/ucrr8a.pfb></sw/share/texmf-dist/fonts/type1/urw/t
imes/utmb8a.pfb></sw/share/texmf-dist/fonts/type1/urw/times/utmr8a.pfb></sw/sha
re/texmf-dist/fonts/type1/urw/helvetic/uhvbo8a.pfb></sw/share/texmf-dist/fonts/
type1/urw/helvetic/uhvb8a.pfb>
Output written on pyPLUTO.pdf (29 pages, 298477 bytes).
